Center for Advanced Imaging websites
Molecular Biology
Image and data processing
Ilastik is a simple, user-friendly tool for interactive image classification, segmentation and analysis. It is built as a modular software framework, which currently has workflows for automated (supervised) pixel- and object-level classification, automated and semi-automated object tracking, semi-automated segmentation and object counting without detection
KNIME Analytics Platform is the open source software for creating data science applications and services. Intuitive, open, and continuously integrating new developments, KNIME makes understanding data and designing data science workflows and reusable components accessible to everyone.
Biophysics
BioNewMetrics is a free open access web site founded in 2009 by D. Holcman. It is devoted to studying cellular biology from molecules to the network level. It presents cutting-edge knowledge in the form of classes, talks and methods and code for computer simulations in various languages (Matlab, Maple, Mathematica, C). The methods are physical modeling, mathematical analysis, numerical simulations and data analysis.
Science Communication